Senior Bioinformaticist - Information Services - Genomics
About The Position
Computational-biologists/bioinformaticists in a large-scale "production" setting to deploy, maintain and evolve the bioinformatics framework for a high-throughput, ultra-rapid turnaround time wholegenome sequencing based clinical setting. Part of a team that'll build the infrastructure ground up using the latest and greatest of the technologies in infrastructure, data storage and analytics, with a strong focus on automation and integration. The environment is highly cross-functional, with a rich medical research heritage and multitude of collaborations with the biotech industry, academic institutions and federal programs.
Requirements
- Bachelor's Degree
- Experience analyzing next-gen sequencing data (Illumina whole genomes or exomes): BCL to annotated variants
- Experience working with and understanding of open source NGS tools like bwa, samtools, vcftools, picard, GATK, Freebayes, ANNOVAR, VEP, etc.
- Experience with unix/linux operating system and software development using any of Ruby, Python, Perl, Bash
- Experience working with HPC scheduling systems such as Moab, TORQUE, LSF, OpenGrid Engine, etc.
Nice To Haves
- Master's Degree
- Experience in CNV and SV calling
- Previous experience working in a CAP/CLIA environment
- Previous experience with cloud-based development or analysis and performing benchmarking of bioinformatics tools
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What This Job Offers
Job Type
Full-time
Career Level
Mid Level
Number of Employees
1,001-5,000 employees
